BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C08LP1|AL425834
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 1312 0.0
>3x_Contig1682
Length = 16889
Score = 1312 bits (642), Expect = 0.0
Identities = 739/794 (93%), Gaps = 1/794 (0%)
Strand = Plus / Minus
Query: 1 gatcatwagtttaaagcacattctgtaggtatttttaccaccaacagaacgtggaaatwa 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 16712 gatcataagtttaaagcacattctgtaggtatttttaccaccaacagaacgtggaaataa 16653
Query: 61 atwaatagaaacatcaacaggctatacatctacaataaatwatatgtaataatttcgcca 120
|| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 16652 ataaatagaaacatcaacaggctatacatctacaataaataaaatgtaataatttcgcca 16593
Query: 121 gagtggtatgawatgcwagcwtcaatatgtgcwagattagcggaawakaaaagtaaaggg 180
||||||||||| |||| ||| ||||||||||| |||||||||||| | ||||||||||||
Sbjct: 16592 gagtggtatgaaatgcaagcatcaatatgtgcaagattagcggaaaagaaaagtaaaggg 16533
Query: 181 gaaatwwacaaattggaaagagtaagagtgattttkaattttgawgcttttctttccatg 240
||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 16532 gaaataaacaaattggaaagagtaagagtgattttgaattttgaagcttttctttccatg 16473
Query: 241 cacaacaaacgataatwgtgcagtctagcttattcgaatcaatgaatagagtctttttta 300
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 16472 cacaacaaacgataatagtgcagtctagcttattcgaatcaatgaatagagtctttttaa 16413
Query: 301 gtgtttttcatttgataaggattagagttttgawggtatttcttcgctggttcattaaag 360
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 16412 gtgtttttcatttgaaaaggattagagttttgaaggtatttcttcgctggttcattaaag 16353
Query: 361 catgtwgagaaaatwtgacgatgatccatcacagaactatggtgcggttwatagatactg 420
||||| |||||||| |||||||||||||||||||||||||||||||||| | ||| ||||
Sbjct: 16352 catgtagagaaaatatgacgatgatccatcacagaactatggtgcggttaaaagaaactg 16293
Query: 421 awaacwaatgataggatawtwwcwacgacaacwatcaaccacacctcctatcataactwt 480
| ||| |||||||||||| | |||||||| ||||||||||||||||||||||||| |
Sbjct: 16292 aaaacaaatgataggataaaaacaacgacaacaatcaaccacacctcctatcataactat 16233
Query: 481 tattttgatagattagggggggggggagaccgatgaagaatagtwattwgcattttccca 540
| || ||||||||||||||||||||||||||||||||||| || |||||| ||||
Sbjct: 16232 aaaaaagaaagattagggggggggggagaccgatgaagaatagtaataagcatttaccca 16173
Query: 541 tcctttgtwcatcccaatwtttgatagatawttggacacaattwatctgcttaatwwgct 600
|||||||| ||||||||| ||||||||| | |||||||||| | ||||||||| |||
Sbjct: 16172 tcctttgtacatcccaatatttgatagaaaaaaggacacaattaaactgcttaataagct 16113
Query: 601 ctaacagttggtgggactggaggacattccttttcatccaaggtggtggcgatgaccttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16112 ctaacagttggtgggactggaggacattccttttcatccaaggtggtggcgatgaccttt 16053
Query: 661 ctgtatttcaagacgacatcgtcaccggtatcacgttgccatgatagggtatgtttcatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16052 ctgtatttcaagacgacatcgtcaccggtatcacgttgccatgatagggtatgtttcatc 15993
Query: 721 cagtgaacgtcatctctttcaggataatcttctctagcgtga-saccacgagattccttt 779
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 15992 cagtgaacgtcatctctttcaggataatcttctctagcgtgagcaccacgagattccttt 15933
Query: 780 ctttcagcagcaga 793
||||||||||||||
Sbjct: 15932 ctttcagcagcaga 15919
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4623
Number of Sequences: 1807
Number of extensions: 4623
Number of successful extensions: 103
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.6 bits)